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µ¥Ï¸°û²âÐò¼¼Êõ(single cell sequencing)
ÐÐÒµÐÂÎÅ 2018-08-28

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SCI-seq

     2017Äê3Ô£¬ÃÀ¹ú¶íÀÕ¸ÔµÄÑо¿ÈËÔ±ÔÚNature MethodsÉÏ·¢±í¡°Sequencing thousands of single-cell genomes with combinatorial indexing (doi:10.1038/nmeth.4154) ¡±ÎÄÕ£¬¿ª·¢³öÒ»ÖÖSCI-seq (single-cell combinatorial indexed sequencing£¬µ¥Ï¸°û×éºÏ±ê¼Ç²âÐò¼¼Êõ)£¬¶à´Î¶Ôϸ°û½øÐÐÌõÐÎÂë±àÂë±ê¼Çºó¶ÔËüÃǽøÐвâÐò£¬¿ÉÒÔͬʱ¹¹½¨ÉÏǧ¸öµ¥Ï¸°ûÎĿ⣬¼ì²âÌåϸ°û¿½±´ÊýµÄ±äÒì¡£ÕâÏî¼¼ÊõËõ¼õÁËÎĿ⹹½¨µÄ³É±¾£¬Ôö¼ÓÁ˼ì²âϸ°ûµÄÊýÁ¿£¬Õâ¶ÔÓÚÌåϸ°û±äÒìµÄ¼ì²â£¬ÓÈÆäÊÇÔÚÖ×Áö½ø»¯¹ý³ÌÖжÔϸ°ûÑǿˡ±äÒìÑо¿¾ßÓÐÖØÒª¼ÛÖµ¡£Ñо¿ÈËÔ±´ÓÅàÑøµÄϸ°ûϵ¡¢Á鳤Àà¶îҶƤ²ã×éÖ¯ºÍÁ½¸öÈËÀàÒÈÏÙ°©Öй¹½¨ÁË´óÔ¼17000¸öµ¥Ï¸°û»ùÒò×éÎĿ⣬Õâ´óÔ¼±ÈÀûÓ󣹿·½·¨Äܹ»¹¹½¨³öµÄ»ùÒò×éÎÄ¿â´óС¸ß³öÁ½¸öÊýÁ¿¼¶¡£ 


µ¥Ï¸°û²âÐò¼¼Êõ(single cell sequencing)


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      LIANTI·¨Í¨¹ýת×ù×Ó²åÈë½øÐÐÏßÐÔ·Å´ó¡£»ùÒò×é±»º¬ÓÐT7Æô¶¯×ÓµÄTn5ת×ù×ÓËæ»úƬ¶Î»¯ £¬T7Æô¶¯×ÓÔÊÐíÏßÐÔÀ©Ôö¡£LIANTI·¨²âÁ¿¿½±´ÊýµÄ¿Õ¼ä·Ö±æÂÊÌá¸ßÁË£³¸öÊýÁ¿¼¶£¨ÄÜÔÚǧ¼î»ù·Ö±æÂʽøÐÐ΢СCNV¼ì²â£¬»ùÒò×鸲¸ÇÂʿɴﵽ97%)£¬ÄÜÖ±½Ó¹Û²ì´Óϸ°ûµ½Ï¸°û²»Í¬µÄËæ»ú·¢ÉúµÄDNA¸´ÖÆÆðʼλµã¡£ËûÃÇÓÃз½·¨¼ì²âÁ˱»×ÏÍâÏßÕÕÉä¹ýµÄµ¥¸öÈËÀàϸ°ûµÄµ¥ºËÜÕËáÍ»±ä£¬½á¹ûÃ÷ÏÔÓÅÓÚĿǰÒÑÖªµÄÆäËû·½·¨¡£ÕâÒâζLIANTIÄܸüÓÐЧ¡¢×¼È·µØ¼ì²â³ö¸ü¶à¼²²¡Í»±ä¡£

 

µ¥Ï¸°û²âÐò¼¼Êõ(single cell sequencing)


CROP-seq

     2017Äê7Ô£¬°ÂµØÀûÑо¿ÈËÔ±ÔÚNature MethodsÉÏ·¢±í¡°Pooled CRISPR screening with single-cell transcriptome readout (doi:10.1038/ nmeth.4227)¡±ÎÄÕ£¬´´ÔìÐԵؽ«CRISPR-Cas9ºÍµ¥Ï¸°ûRNA²âÐòÁ½ÖÖ½ÏÓÐǰ¾°µÄ»ùÒò×éѧÁìÓò½áºÏÔÚÒ»Æð£¬·¢Ã÷ÁËÕâÖÖ±»³Æ×÷CROP-seqµÄµ¥Ï¸°û²âÐò·½·¨ (CRISPR droplet sequencing£¬ CRISPRÒºµÎ²âÐò), ÄÜ´ó¹æÄ£Íê³ÉµÄ¸ßͨÁ¿»ùÒòµ÷¿ØµÄ·ÖÎö¡£

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µ¥Ï¸°û²âÐò¼¼Êõ(single cell sequencing)


scCOOL-seq

2017Äê8Ô£¬±±¾©´óѧÌÀ¸»³ê½ÌÊÚÍŶÓÔÚCell Research ÉÏ·¢±í ¡°Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells (doi: 10.1038/cr.2017.82)¡±ÎÄÕ£¬¿ª·¢ÁËÒ»ÖÖµ¥Ï¸°û¶àÖØ²âÐò¼¼Êõ (scCOOL-seq)£¬¿ÉÒÔ¶ÔÒ»¸öµ¥Ï¸°ûͬʱ·ÖÎöȾɫÖÊ״̬/ºËСÌ嶨λ¡¢DNA¼×»ù»¯¡¢»ùÒò×鿽±´Êý±äÒìºÍȾɫÌå±¶ÐÔ±¶ÐÔ¡£²¢²ÉÓÃÕâÒ»¼¼ÊõÔÚµ¥Ï¸°û·Ö±æÂÊÉÏϵͳ¡¢ÉîÈëµØ½âÎöÁËСÊó×Å´²Ç°ÅßÌ¥·¢Óý¹ý³ÌÖбí¹Û»ùÒò×éÖØ±à³ÌµÄ¹Ø¼üÌØÕ÷£¬ÒÔ¼°È¾É«ÖÊ״̬ÓëDNA¼×»ù»¯Ö®¼äµÄ»¥¶¯¹ØÏµ¡£ÕâÊÇÒ»´ÎÔÚµ¥Ï¸°ûÄÚ¶Ôͬһ¸öµ¥Ï¸°û½øÐжà´ï5¸ö²ãÃæµÄ»ùÒò×éºÍ±í¹Û»ùÒò×éÌØÕ÷µÄ·ÖÎö£¬Í»³öÁËDNA¼×»ù»¯ºÍȾɫÖÊ״̬µÄ²»Í¬Ä£Ê½ºÍ¹¦ÄÜ¡£

 

µ¥Ï¸°û²âÐò¼¼Êõ(single cell sequencing)


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DroNC-seq

      10Ô£¬BroadÑо¿ËùÕÅ·æ½ÌÊÚÍŶÓÔÚNature MethodsÉÏ·¢±íÌâΪ¡°Massively Parallel Single-Nucleus RNA-Seq with DroNc-Seq (doi: 10.1038/nmeth.4407)¡± µÄÎÄÕ£¬Ìá³öÁËÒ»¸öеIJâÐò¼¼Êõ£ºDroNc-Seqµ¥Ï¸°û±í´ïÆ×·ÖÎö¼¼Êõ¡£¸Ã¼¼Êõ»ìºÏÁËsNuc-Seq¼¼ÊõÓë΢Á÷¿Ø¼¼ÊõµÄµ¥Ï¸°ûºËRNA²âÐò·½·¨£¬¿ÉÒÔÔڽṹ¸´ÔÓµÄ×éÖ¯ÖиüÓÐЧµØ·ÖÎö´óÁ¿Ï¸°û»òϸ°ûºËÖеÄRNA£¬¿ªÆôµ¥Ï¸°ûºË²âÐòµÄ¹æÄ£»¯Ê±´ú¡£

   

µ¥Ï¸°û²âÐò¼¼Êõ(single cell sequencing)


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SISSOR

      11Ô¼ÓÖÝ´óѧʥµØÑǸç·ÖУÕÅûd½ÌÊÚÍŶÓÔÚPNASÉÏ·¢±íÌâΪ¡°Ultra-accurate Genome Sequencing and Haplotyping of Single Human Cells (doi: 10.1073/pnas. 1707609114)¡±µÄÎÄÕ¡£¿ª·¢ÁËÒ»¸öÃûΪ¡°SISSOR¡± (΢Á÷Ìå·´Ó¦Æ÷·¨µ¥Á´²âÐò)µÄ·½·¨£¬ÓÃÀ´½øÐÐ׼ȷµÄµ¥Ï¸°û»ùÒò×é²âÐòºÍµ¥±¶Ìå·ÖÐÍ¡£

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µ¥Ï¸°û²âÐò¼¼Êõ(single cell sequencing)


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snDrop-seq+scTHS-seq

       ÕÅûd½ÌÊÚÍŶӱ¾ÔÂÓÖÔÚNature BiotechnologyÔÓÖ¾ÉÏ·¢±íÁË¡°Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain (doi: 10.1038/nbt.4038)¡±µÄÎÄÕ¡£¿ª·¢ÁË»ùÓÚ±ù¶³×éÖ¯¸ßͨÁ¿µ¥Ï¸°ûºË²âÐò·½·¨À´»æÖƳÉÄêÈËÄÔµÚ¶þ´úµ¥Ï¸°ûͼÆ×£¬ÔÙ´ÎÒý±¬Á˵¥Ï¸°ûÑо¿µÄÈȵã¡£

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